List of tools frequently used while genome assembly
...genome assembly characteristics ANI.pl (https://github.com/chjp/ANI) CheckM (v. 1.0.7) Prokka (v. 1.12) QUAST (v. 2.3) mummer (v. not available) If...1935 days ago
Software for genome assembly !
...ab.org/ 10 Bandage graph assembly viewer https://rrwick.github.io/Bandage/ 11 Gepard dotter http://cube.univie.ac.at/gepard 12 MUMmer aligner and plotter http://mummer.sourceforge.net/1349 days ago
Frequently used bioinformatics tools for viral genome analysis !
...ken: Kraken: ultrafast metagenomic sequence classification using exact alignments. Wood, D. E. & Salzberg, S. L. Genome Biol. 15, R46 (2014). MUMmer: Versatile and open software...1052 days ago