Comment on "List of popular bioinformatics software/tools"
MEDIPS: genome-wide dierential coverage analysis of sequencing MEDIPS: genome-wide differential coverage analysis of sequencing data derived from DNA enrichment experiments https://www.bioconductor.org/packages/3.3/bioc/vignettes/MEDIPS/inst/doc/MEDIPS.pdf3013 days ago
3051 days ago
Comment on "Does anyone have Nanopore latest updates?"
Improved data analysis for the MinION nanopore sequencer http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3290.html A complete bacterial genome assembled de novo using only nanopore sequencing data http://biorxiv.org/content/early/2015/02/20/0155523373 days ago
Comment on "R and Bioconductor Tutorial"
There are several R packages to use image data for statistical analysis and modeling EBImage http://master.bioconductor.org/help/course-materials/2010/CSAMA10/100617-pau-brixen-ebimage-2.pdf...3544 days ago
3545 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
...ython is highly recommended as many new good tools made recently in python. R is good for downstream analysis like doing statistical analysis, create fancy graphs(ggplot2), work with rnaseq data (Deseq,degseq,etc), pathway analy...3546 days ago
Comment on "Which of the following programming language is best for a bioinformatics beginner?"
Well, if you are doing NGS analysis, C and C++ is a good option. It is a lower level language compared to R, PERL, & Python. But, due to the huge amount of data content in NGS, the efficiency...3546 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data http://www.biomedcentral.com/1471-2105/15/280/abstract3563 days ago
Comment on "Which are the best statistical programming languages to study for a bioinformatician?"
...or & Principal Components Analysis Yes Ye... Missing Data Imputation Yes &... Longitudinal (Panel) Data Yes Yes... Cluster Analysis Yes Ye...3567 days ago
Comment on "R and Bioconductor Tutorial"
On DataCamp.com you can find free interactive courses on data science and R (similar to try...ction to R course https://www.datacamp.com/courses/introduction-to-r> Data analysis and statistical inference...m Duke University https://www.datacamp.com/courses/data-analysis-and-statistical-inference_min...3569 days ago