2340 days ago
AIRVF: a filtering toolbox for precise variant calling in Ion Torrent sequencing
...flowgram, raw and mapped reads and called variants to reduce artifact-driven false variant calls. Tests on sequencing data of standard reference material showed up to ∼98% reducti...2325 days ago
HS3D: Homo Sapiens Splice Sites Dataset
...from GenBank Rel.123. The aim of this data set is to give standardized material to train and to assess the pr...sh;AG junctions (65+74), including insufficient data (not enough material for a 140 nucleotide window)...1421 days ago
Genome assembly training tutorial at Galaxy !
In this tutorial we assemble and annotate the genome of E. coli strain C-1. This strain is routinely used in experimental evolution studies involving bacteriophages. For...1224 days ago
1224 days ago
Introduction to Bioinformatics and Computational Biology
This is the course material for STAT115/215 BIO/BST282 at Harvard University. Xiaole Shirley Liu (lead instructor)Joshua StarmerMartin HembergTing WangFeng Yue Ming TangYang Li...1195 days ago
1214 days ago
Calling variants in non-diploid systems
The main challenge associated with non-diploid variant calling is the difficulty in distinguishing between the sequencing noise (abundant in all NGS platforms) and true...1042 days ago
Bioinformatics Training Material !
Glittr is a curated list of bioinformatics training material.All material is: In a GitHub or GitLab repository Free to use Written in markdown or similar NOTE: This list of...413 days ago