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Results for "Media"

Bio-Scripts

• • Jit@jit.aber

  

  Loop over with all files in a directory in bash

  #!/bin/bash FILES=/media/ComparativeGenomics/ncbi-genomes-2017-11-13/* ref=/media/ComparativeGenomics/ncbi-genomes-2017-11-13/GCA_000196735.1_ASM19673v1_genomic.fna path=/home/urbe/Tools/SATSUMA/satsuma-...

  2340 days ago

• • Jit@jit.aber

  

  Bash script to run Busco2 !

  ...H:/home/urbe/Tools/augustus-3.2.3/scripts export AUGUSTUS_CONFIG_PATH=/home/urbe/Tools/augustus-3.2.3/config #run BUSCO python BUSCO.py -i /media/urbe/MyDDrive/longMIRA_canuCo...

  2146 days ago

• • Jit@jit.aber

  

  Running Trinity on RNA-seq !

  ...qType fq --max_memory 250G --left /media/urbe/MyPassport/rnaseq_boris/....IND11_noribo_clean.fastq --right /media/urbe/MyPassport/rnaseq_boris/...read files: $VAR1 = [ '/media/urbe/MyPassport/rnaseq_boris/...R1 = [ [ '/media/urbe/MyPassport/rnaseq_boris/...

  2136 days ago

• • Jit@jit.aber

  

  Running Transrate !

  ...-output=transrateSTAT [ INFO] 2018-07-13 14:54:03 : Loading assembly: /media/urbe/MyPassport/BorisTrinityA...embly/Trinity.fasta [ INFO] 2018-07-13 14:54:21 : Analysing assembly: /media/urbe/MyPassport/BorisTrinityA...

  2132 days ago

• • Jit@jit.aber

  

  Downloading GATK !

  ...INSTALL[gatk-4.0.2.1] ./gatk --list [] Using GATK jar /media/jitendra/OSDisk/SNP/gatk-4.0....jdk.use_async_io_write_tribble=false -Dsamjdk.compression_level=1 -jar /media/jitendra/OSDisk/SNP/gatk-4.0....

  2084 days ago

• • Jit@jit.aber

  

  Pack a perl program with their dependencies on Ubuntu !

  ...rl is know for symbols ! Rahul Nayak@rahul Understand Social Media Importance for Researchers Wi...the Strategy !By Rahul Nayak 61 days ago UnderstandSocialMediaImportanceResearchersBenefitsS...

  1520 days ago