Comment on "Want to Know which genome assembler rule the world ?"
Canu Assembler is my personal favourate.Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequelor Oxford Nanopore MinION).1953 days ago
Comment on "poRe: an R package for the visualization and analysis of nanopore sequencing data"
We now need to install the poRe dependencies in R, which is very easy: R source("http://www.bioconductor.org/biocLite.R") biocLite("rhdf5") install.package...2177 days ago
Comment on "SPAdes hybrid genome assembly"
use SPAdes to assemble the data. SPAdes is a swiss-army knife of genome assembly tools, and by default includes read correction. This takes up lots of RA...2177 days ago
Comment on "Does anyone have Nanopore latest updates?"
Nano conference https://publications.nanoporetech.com/2016/06/05/london-calling-talk-sara-goodwin-cshl-rapid-cnv-characterisation-of-clinical-cancer-samples-on-the-oxford-nanopore-minion/2893 days ago
Comment on "Does anyone have Nanopore latest updates?"
Yesterday, in his keynote address to the company’s user group conference in London, CTO Clive Brown announced the development of a new smartphone-powered nanopore se...2900 days ago
Comment on "Does anyone have Nanopore latest updates?"
Sequencing ultra-long DNA molecules with the Oxford Nanopore MinION http://biorxiv.org/content/early/2015/05/20/019281.full-text.pdf+html Additional tools for analyzing Oxford Nanopore minION data by John Urban https://github.com/JohnUrban/poreminion3274 days ago
Comment on "Does anyone have Nanopore latest updates?"
Improved data analysis for the MinION nanopore sequencer http://www.nature.com/nmeth/journal/vaop/ncurrent/full/nmeth.3290.html A complete bacterial genome assembled de novo using only nanopore sequencing data http://biorxiv.org/content/early/2015/02/20/0155523360 days ago
Comment on "Does anyone have Nanopore latest updates?"
Oxford Nanopore announced that it has raised $59 Million (£35 million) from both new and existing investors in the UK, US and mainland Europe. In its last fund raisi...3556 days ago
Comment on "Does anyone have Nanopore latest updates?"
Nanopore reads from MinION Sequencer (Oxford Nanopore) http://figshare.com/articles/A_P_aeruginosa_serotype_defining_single_read_from_our_first_Oxford_Nanopore_run/10529963613 days ago
Comment on "Does anyone have Nanopore latest updates?"
Results from Oxford Nanopore's MinION are promising, but fall short of high expectations. Find more at nature news http://www.nature.com/news/data-from-pocket-sized-genome-sequencer-unveiled-1.147243672 days ago