Comment on "Tools for Differential expression analysis"
...a. It uses a negative binomial distribution to model the count data and provides m...of RNA-Seq data. It uses a generalized linear model to model the count data and p...RNA-Seq data. It uses a Bayesian framework to model the gene expression data and...425 days ago
Comment on "Tools for RNA classification"
...nfernal is a popular tool for RNA classification that uses a covariance model approach to identify RNA homo...: Rfam is a database of RNA families and their corresponding covariance models. It is based on Infernal and...425 days ago
1150 days ago
Comment on "Sibelia: A comparative genomics tool"
...d cycles called "bulges", see [1] for more details. Graph is a good model for describing the algorithm,...erations that are actually performed with the genome behind the graph model. Suppose that somewhere in...1289 days ago
Comment on "Commercial and public next-gen-seq (NGS) software"
dDocent: a RADseq, variant-calling pipeline designed for population genomics of non-model organisms https://peerj.com/articles/431/3552 days ago
Comment on "Bio++ : C Language libraries for your biological need"
...te a distance matrix and build a phylogenetic tree according to several model of evolution and reconstruction methods).bppML (Optimize a phylogenetic tree and other model parameters according to maxim...3830 days ago
Comment on "Best practices in bioinformatics training for life scientists"
Recently, a group of scientist investigated the effects of our Bio-ITEST teacher professional development model and bioinformatics curricula on cognitive traits (awareness, engagemen...3899 days ago