3409 days ago
RNA-Seq De novo Assembly Using Trinity
...novel method for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data. Trinity combines three independent software modules: Inchworm, Chrysalis, and But...2958 days ago
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GARM:Genome Assembly, Reconciliation and Merging
The pipeline is based mainly implemented using Perl scripts and modules and third-party open source software like the AMOS (Myers et al., 2000) and MUMmer (Kurtz et al., 2004) package...2687 days ago
2652 days ago
Many-Core Engine (MCE) for Perl example
...kers. MCE enhances that model by adding the ability to chunk the next n elements from the input stream to the next available worker. CORE MODULES Three modules make up the core engine for M...2644 days ago