Results for "NCBI Remap"
Blogs
List of bioinformatics workflow management tools !
Here are list of Workflow Managers BigDataScript – A cross-system scripting language for working with big data pipelines in computer systems of diff...1154 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon&r...ferred to as shared synteny. The NHBLI/NCBI Glossary define synteny as &l...tance of all these regions (http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2...ent synteny blocks. SyDiG (http://www.ncbi....2622 days ago
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Bookmarks
Download mutliple fasta file from NCBI in one GO!!
if you have less time, then use three ways mentioned in bookmark link to extract/download all fasta sequences in single click given that you already have a list of GIs...3922 days ago
Next Generation Sequencing (NGS) Tutorials
Institute of computational biomedicine, Cornell University provide an NGS workshop tutorial at http://chagall...or high-throughput analysis of next-generation sequencing data. http://www.ncbi....3499 days ago
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Pages
Virtual Bioinformatics Online Tutorial
There are several vitual online bioinformatics training centres. Here I provide some of them: Virtual Institute...s courses offered by IMC Bioinformatics, University of Tampere Tutorials using NCBI...3933 days ago
Genome Assembly Tools and Software - PART2 !!
The genome assemblers generally take a file of short sequence reads and a file of quality-value as the input. Sinc...version of Phrap.It is capable of assembling data downloaded directly from the NCBI...2698 days ago
Top-level pages
- Genomics is the study of the genomes of organisms. The field includes intensive efforts to determine the entire DN...community. Sequin Sequin is a stand-alone software tool developed by the NCBI...
3954 days ago
Useful Links for Bioinformaticians
Bioinformatics demands knowledge of various inter-linked subjects. This page provide links of some the good computer, biology and related tutorials. Introductio...3143 days ago
- +16 more Top-level pages
Wire posts
News
- In current era, we are handling huge amount of genomics data, and analysing it to make some biological sense out o...integrated into web applications or software pipelines. Find more @ http://www.ncbi....
3902 days ago
- The informal conversations that researchers have at scientific meetings look set...ational Center for Biotechnology Information (NCBI) has its way. On 22 October, the NCBI of Bethesda, Maryland, launch...ir invited guests can use the system. But the NCBI'...
3858 days ago
- +31 more News
Opportunity posts
Postdoctoral Fellowship in Bioinformatics and Evolutionary Genomics
Postdoctoral Fellowship in Bioinformatics and Evolutionary Genomics Organization National Human Genome Research...rmation Technology (CIT) and the National Center for Biotechnology Information (NCBI)...3334 days ago
Postdoctoral Fellowship in Bioinformatics at pesolelab
Job Description: Bioinformatics postdoc positions are available in the area of genomics with main focus on exome a...look at our PubMed publications for more details about our research http://www.ncbi....3151 days ago
ResearchLabs posts
- The Shendure Lab is part of the Department of Genome Sciences at the University of Washington (Seattle, WA). The m...efly below, and a full list of publications is available via PubMed. http://www.ncbi....
3873 days ago
- Interested in understanding the evolution of life. To obtain glimpses of such understanding, we employ existing and new methods of computational biology to perform research in several major areas. https://www.ncbi.nlm.nih.gov/research/groups/koonin/
2320 days ago
Fun
Bioinformatician become producer/director !!!
If a Bioinformatician starts producing Hindi Bollywood movies, names will be like this...i Promoter Gene se Genome tak. Maine BLAST kiya. NCBI wale Data le jayenge R...bari Structure Dus Numbari GCG Karo Sajana Naukar NCBI...3931 days ago
Video
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
3920 days ago
- http:--www.biotechnology.jhu.edu- Tutorial for PSI-BLAST, an extension of BLAST that uses matrix algebra. BLAST is a cornerstone bioinformatics tool at NCBI. BLAST is the Basic Local Alignment Search tool and will protein and DNA sequences that are related to a sequence that the user provides.
3908 days ago
- +3 more Video
Bio-Scripts
- (JitMetaENV) ➜ JitMeta conda install grabseqs -c louiejtaylor -c bioconda -c conda-forge Collecting package metadata (current_repodata.json): done Solving environment: done ==> WARNING: A newer version of conda exists.
1229 days ago
Python script to download covid genome !
#!/usr/bin/env python3 # these are the publicly available "complete" sequences # https://www.gisaid.org/ has m...p import requests import yaml seqs = yaml.load(requests.get("https://www.ncbi....1148 days ago
- +26 more Bio-Scripts
Groups
BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It provi...es, and application of BioJava in biological researchs. Reference @ http://www.ncbi....3915 days ago
Tags
- NCBI Remap. This tool is conceptually similar to liftOver in that in manages conversions between a pair of genome assemblies but it uses different methods to achieve these mappings. It is also available through a simple web interface or you can use the API for NCBI Remap. More at http://www.ncbi...
Tags: Bioinformatics, NCBI, NCBI Remap, Liftover, Annotation
3018 days ago
