RASTtk : algorithm for building custom annotation pipelines and annotating batches of genomes
The RAST (Rapid Annotation using Subsystem Technology) annotation engine was built in 2008 to annotate bacterial and archaeal genomes. It works by offering a standard software pipeline for id...2943 days ago
GATB : Genome Analysis Toolbox with de-Bruijn graph
The Genome Analysis Toolbox with de-Bruijn graph (GATB) provides a set of highly efficient algorithms to analyse NGS data s...2942 days ago
Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds on the concept of coverage plots and aims to assist (amongst other...2920 days ago
Linux command line exercises for NGS data processing
The purpose of this tutorial is to introduce students to the frequently used tools for NGS analysis as well as giving experience in writing one-liners. Cop...it is a language in itself and is used more often to manipulate NGS data a...2888 days ago
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VirtualFlow: a versatile, parallel workflow platform for carrying out virtual screening
...ailored to different types of tasks: VFLP: VirtualFlow for Ligand Preparation VFVS : VirtualFlow for Virtual Screenings They use the same core technology regarding the workflow manage...1435 days ago
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