Commercial and public next-gen-seq (NGS) software
...d a set of script targeted to NGS. There are modules to: clean...by next-generation sequencing technology, back to the reference...thered through 454 sequencing technology (GS20 or GS FLX). Compatible...ersity of California, BerkeleyNGS-Trex: Next Generation Sequencing Tra...3532 days ago
List of Biotechnology Research Laboratory, University, and Centre in India
...tute of Himalayan Bioresource Technology, Palampur ITRC - Industrial...ational Institute of Science, Technology & Development Studies, Ne...culture Indian Institute of Technology Indira Gandhi Center for At...versity Institute of Chemical Technology Narendra Deva University of...2584 days ago
Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de...short reads, emerged by next-generation sequencing technology, back to the reference genome...mblies using reads gathered through 454 sequencing technology (GS20 or GS FLX). Compatible...3255 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools i...riant calling and analysis of NGS data Supported workflows inc...ons: Supports all established NGS sequencing platforms- SOLiD,...ariants in pool or individual NGS data, reports overall p-value...daptive multiblups, LD weightings Input...2922 days ago
2882 days ago
Genome Assembly Tools and Software - PART1 !!
...ta, incorporates cutting-edge technology and algorithms, while...with the rest of your typical NGS workflow. Metassembler 1...arge and complex metagenomics NGS reads, such as soil. It makes use of...2.2 – Hybrid Sequencing Technology Assembler ZORRO is a hybri...2699 days ago
Quick next generation sequencing (NGS) terms definition
fragment size: the Illumina WGS protocol generates paired-end reads from both ends of longer fragments. The lengths of these fragments are assumed to be sampled from...2535 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and softwa...emote-Driver - Perl Bindings to the Selenium Webdriver ser...VG renderer in Perl famzah/langs-performance - C++ vs. Py...atypus - Write Perl bindings to non-Perl libraries with FF...and validate 'CouponCode' strings esert...2502 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-se...+) http://www.cs.cmu.edu/~ckingsf/software/sailfish/ Salmon...NP variants directly from raw NGS sequence reads by counting un...ide Human SNP Array) from raw NGS reads (k-mer based) Software...rge.net/projects/ksnp/files/ NGS-MC Ph...2384 days ago
Converting BLAST output into CSV
Suppose we wanted to do something with all this BLAST output. Generally, that’s the case - you want to r...that using the ‘git’ program: git clone https://github.com/ngs-docs/ngs-script...2350 days ago