Worldwide funding agencies to fund your bioinformatics research !!
Are you seeking funding for research or training in a particular area? Check out the following agencies ... National Science Foundation: For the love of scien...2950 days ago
Tools for Searching Repeats And Palindromic Sequences
...ts Finder RECON RepeatRunner REPuter Imperfect Microsatellite Extractor (IMEx) Spectral Repeat Finder (SRF) REPFIND CRISPRfinder GrailEXP CONREPP find_palindromes Palindr...2223 days ago
Tool: Gene Set Clustering based on Functional annotation (GeneSCF)
....biostars.org/p/197414/#197416 , 2) https://www.biostars.org/p/191532/#191540 The advantage of using GeneSCF over other enrichment tools is that, it performs enrichment analysis in real-time...2883 days ago
Genome Assembly Tools and Software - PART1 !!
...es in order to address variable transcript expression levels. It first filters and merges the multi-k assemblies, generating a much smaller set of nonredundant contigs. It contains...2697 days ago
Awesome perl frameworks, libraries and software - PART 1
.... NodeJS vs. Go vs. Ruby performance benchmark agentzh/old-openresty - Obsolete 1st generation of OpenResty written mostly in Perl. P...ness - Run Perl standard test scripts with statistics openresty/lemplate - OpenResty...2501 days ago
Tools for bacterial whole genome annotation
...t: http://www.cbrc.kaust.edu.sa/BEACON/. BlastKOLA: Assigns K numbers to the user's sequence data by BLAST searches, respectively, against a nonredundant set of KEGG GENES. KO...2343 days ago
BBSplit: Read Binning Tool for Metagenomes and Contaminated Libraries
....fq BBSplit is available here:https://sourceforge.net/projects/bbmap/ The sensitivity can be raised to be equivalent to BBMap with these flags: "minratio=0.56 minhits=1 maxindel=1...2326 days ago
2317 days ago
Awk for Bioinformatician and computational biologist
...print will print $0 by default), and within this block, we can change $0, for example to assign the first field to $0 for third line (NR==3), we can use: $ awk 'NR==3{$0=$1}1' data/test.tsvcont...2291 days ago
Computational resources for TE discovery and TE detection
...utational analysis. Following are the list of resource and location for TE discovery and TE detection: BLASTER suite http://urgi.versailles.inra.fr/development/blaster/ ...2286 days ago