Results for "Next Generation Sequencing (NGS) Conference"
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Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput seque...ta in this way is often required: Reads from small-RNA sequencing...2927 days ago
- Platanus is a novel de novo sequence assembler that can reconstruct genomic sequences of highly heterozygous diploids from massively parallel shotgun sequencing...
2927 days ago
Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds on the concept of coverage plots and...ssembly or identification of structural variation in a genome re-sequencing...2920 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a reference genome. Uniquely among...K can align reads generated by all the major seque...sistent mappings for all the generated data (sequencing...2920 days ago
- Stampy is a package for the mapping of short reads from illumina sequencing machines onto a reference genome. It's recommended for most workflows, including those for genomic resequencing...
2920 days ago
- methylKit is an R package for DNA methylation analysis and annotation from high-throughput bisulfite sequencing. The package is designed to deal with seque...seq. It can also handle whole-genome bisulfite sequencing...
2906 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plots (TAGC plots) to visualise t...mputational Biology special issue : Quality assessment and control of high-throughput sequencing...
2896 days ago
- The Genome Assembly Evaluation Metrics and Reporting (GAEMR) packa...e input format to be entered into GAEMR’s analysis pipeline, hence enabling the generation...
2895 days ago
- LoRMA is a tool for correcting sequencing errors in long reads such those produced by Pacific Biosciences sequencing...
2179 days ago
CovCal: Coverage / Read Count Calculator
Coverage / Read Count Calculator Calculate how much sequencing you need to hit a target depth of coverage (or vice versa). Instructions: set the read length/configuration and geno...2179 days ago
