List of genome announcement, notes and reporting journals
Faced with an increasing number of articles describing DNA data and a need for more app...ryote parasites, virus, bacteria and their respective vectors, as well as re-sequencing or comparative genome analyse...2002 days ago
List of cancer genomics research web resources !
Major web resources for cancer genomics research CGHub https://cghub.ucsc.edu/ Compreh...COSMIC http://cancer.sanger.ac.uk Largest somatic mutation database; genome sequencing paper curation CPRG http://w...2314 days ago
Bioinformatics tools developed for Oxford Nanopore data analysis !
MinION is the only portable real-time device for DNA and RNA sequencing. Each consumable flow cell can now generate 10–20 Gb of DNA sequence data. Ultra-long read lengths are possibl...2314 days ago
BBTools for bioinformatician !
BBMap.sh Mapping Nanopore reads BBMap.sh has a length cap...truseq.fa.gz,truseq_rna.fa.gz,nextera.fa.gz" and get them all (t...ode, once the line hits zero, sequencing more is not useful.In cumulat...quality-score issues with the NextSeq platform, and the possibility of...2264 days ago
10 NGS services companies around the globe !
...company provides DNA and RNA sequencing and bioservices solutio...trial areas. It also provides next generation sequencing services including...cing, NGS barcode labels, and next generation sequencing technologies; and...Inc. provides next generation sequencing services such as whole genome...1253 days ago
Bioinformatics tools for telomere to telomere assembly !
● Merfin – k-mer-based assembly and variant calling evaluation for impr...assemblies in conjunction with k-mer count information from raw, short-read sequencing data to genotype a wide spect...985 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...s of tiny parts and read on a sequencing computer in a genome sequencing...nce this is what the Illumina sequencing pipeline creates. This will h...elvetSOAP-denovoMIRAALLPATHS Next step is to assess the suitability a...https://sites.google.com/site/nextgengenomics/ingap and http://ingap.s...1198 days ago
Frequently used bioinformatics tools for viral genome analysis !
IVA: accurate de novo assembly of RNA virus genomes. Hunt M, Gall A, Ong SH, Brener J,...btv120. Epub 2015 Feb 28. Adapter sequences: Optimal enzymes for amplifying sequencing libraries. Quail, M. a et al....1041 days ago
Illumina based assembly pipeline steps !
Illumina Merge re-sequenced FastQ files (cat) Read QC (FastQC) Adapter trimming...of multiple variant calling and consensus sequence generation routes (iVar variants and con...ent, mutation calling and sequence quality checks (Nextclade)...871 days ago
Useful Bioinformatics Analysis Tools !
CoMeta Classificier of reads from metagenomic sequencing experiments. • &nb...space-saving solution for raw sequencing data, Bioinformatics,&nb...M Experimental compressor of sequencing reads. • Gra...obust mapping of whole genome sequencing data, Poster at The Biol...857 days ago