2147 days ago
List of motif discovery tools !
...with a K-meanS based algorithm Find information about tandem repeats in proteins that carry fundamental biological functions and are related to a number of human diseases. TMFun...2007 days ago
Understating pacbio reads name !
...───────4────────────────┘└5┘└6┘└7┘└────8────┘└─9─┘└10┘ "m" = movie Time of Run Start (yymmdd_hhmmss) Instrument Serial Number SMRT Cell Barcode Set Number (a.k.a. "Look Number". Deprec...2004 days ago
1850 days ago
List of perl special symbols !
...Special Symbols – File handlers $@ Perl error string $! Error number from C, ‘errno’...special file handle for command line filenames $. – current line number $/ - input line delimiter $...1573 days ago
Perl one-liner for beginners !
...be called in a loop. Prints $_ at the end This counts the number of quotation marks in each li...extFile One-Liner: Print second column, unless it contains a number perl">perl -lane '...1395 days ago
Protocol for De novo Genome Assembly using Illumina Reads
...address and describe the de novo assembly method for small to medium-sized genomes. What is de novo genome assembly?The method of taking a large number of short DNA sequences and pl...1218 days ago
Ancient whole genome duplication (WGD) detection tools !
...ed on the Ks distribution map. Among them, Ks is defined as the average number of synonymous substitutions a...and there is also a Ka corresponding to it, which refers to the average number of non-synonymous substitutio...1169 days ago
Levenshtein and Damerau-Levenshtein distance !
Levenshtein Distance Also known as Edit Distance, it is the number of transformations (deletions, insertions, or substitutions) required to transform a source string into the target...964 days ago
958 days ago