Results for "PU"
Top-level pages
Frequent parameters for bioinformatics tools !
...--subset 1000 (for PacBio) SPAdes --careful --disable-gzip-output --cov-cutoff auto --phred-...dentity 95 blastp (VF) -culling_limit 2 RGI (ABR) --input_type contig bowtie2...1301 days ago
Bioinformatics in Africa:- Part 1
...rit of the researchers around their axis of research. • Bring an active help to the improvement of the public health while having for c...1205 days ago
- ...; Elgg Type umask 022 Change into your public_html directory (aka folder).cd public_html make a directory ca...this correctly) Elgg Install Directory /home/your-user-id/public_html/elgg/elgg.1.8.0.1/...
907 days ago
Special Nucleotide Characters / Symbols !
...mbols Nucleotide symbol Full Name A Adenine C Cytosine G Guanine T Thymine U Uracil R Guanine / Adenine (purine) Y Cytosine / Thymi...885 days ago
Short-read assembly using Spades !
...-1 illumina_R1.fastq.gz -2 illumina_R2.fastq.gz --careful --cov-cutoff auto -o spades_assembly_all_illumina -1 is input file of forward reads -2 is input file of reverse reads --car...840 days ago
- ...working engine that allows the creation of social environments such as campus social networks and internal...ling Elgg on a Ubuntu 18.04 VPS. Prerequisites A fresh Vultr Cloud Compute instance with Ubuntu 18.04...
621 days ago
- Short Read Simulators With the popularity of next-generation sequen...developed. Currently, many of the popular short read simulators are...platforms. Listed below are some popular short read simulators. Lin...hnologies. Currently, many of the popular long read simulators are d...
598 days ago
Tools for Geospatial data analysis !
...an planning, environmental science, public health, and more. These t...he list includes some of the most popular and widely used geospatial...tools are more focused on data manipulation and analysis, such as F...fdkm RTree - https://lnkd.in/dURMiYpU Rasterio - https://lnkd.in/d...425 days ago
Bioinformatics tools for genome assembly !
...ecific requirements of your project, the available data types, and the computational resources at your disposal. Always refer to the respective tool's documentation and publications for the most up-to-...301 days ago
Steps to find all the repeats in the genome !
...-poly -species <species_name> -dir <output_directory> -length <mi...e name of the species you are analyzing. <output_directory>: The directory...run it to conveniently parse the RepeatMasker output files. Here's an example of...263 days ago
