Results for "Perl in a day"
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Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference...s Wu and Colin Watanabe at Genentec. C/Perl for Unix. * gnumap - The Geno...Michael Smith Genome Sciences Centre. Perl/Linux. * SOAPdenovo - Part of...the National University of Singapore. Per...3256 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment, RNA-...st Description: Standalone program, language C++, Perl Input: mpileup (SAMtools) O...nomes”; integrates four algorithms; written in Per...2922 days ago
- Linux Commands Cheat Sheet File System &nbs...updatedb command. Much faster than find sed -i 's/day/night/g' file — find all occurrences of day in a file and replace them wi...
2888 days ago
Genome Assembly Tools and Software - PART1 !!
...n graph, capable of assembling a human genome on a desktop computer in a day MaSuRCA 3.1.3 – Who...results both on bacterial en eukaryotic datasets. The command-line Perl script and additional files...2699 days ago
Perl Special Vars Quick Reference
$_ The default or implicit variable. @_ Subroutine parameters. $a$b sort com...ess. $0 Program name. $^O Operating System name. Perl Status Info $] Old: Version and patch number of per...2658 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner-perl - MySQLTuner is a script written in Perl that will assist you with you...ols - various standalone perl scripts chromatic/little_pla...ols is a collection of simple perl scripts which allow you to ea...2503 days ago
- It is often necessary to import sample textbook data into R before you start working on your homework. Excel...how to load an Excel spreadsheet named "mydata.xls". This method requires Per...
2503 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudoalignment for rapid determinatio...-containing long sequence (e.g., ONT or PacBio reads, draft genomes) Software (Per...2385 days ago
Edit distance application in bioinformatics !
There are other popular measures of edit distance, which are calculated using a di...::Levenshtein::Damerau defaults to using a pure perl implementation, but if you've...n edit distance. Text::Fuzzy::PP is a pure per...2355 days ago
Bioinformatics Web Application Development with Perl
...dash;were easy to create with Perl and CGI. Thanks to Perl's ubiquity as a language for...faces and powerful backends. Perl is still well suited for deve...ools and techniques of modern Perl. See, for example, the ever-g...uest routing, and output. The days of slinging a string here, an...2335 days ago
