List of comparative genomics resources !
...n -- A suite of web tools for molecular evolution, phylogenetics and phylogenomics Phylemon is a web server th...-- a metabolic gene evolution resource Find metabolic networks and phylogenomic information on a taxonomicall...674 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of applications. Reference-free methods analyse unprocessed sequencing data without r...2877 days ago
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
ETE v3, featuring numerous improvements in the underlying library of methods, and providing a novel set of standalone tools to perform common tasks in comparative genomics...2264 days ago
Awesome perl frameworks, libraries and software - PART 3
...n/p5-perl-metrics-lite - Pluggable Perl Metrics System daisieh/phylogenomics - (Mostly) Perl scripts that do something related to phylogenomic analysis. carwynmoore/perl-n...2491 days ago
List of bioinformatics open source projects/software.
...utral bioinformatics toolkit built using the Microsoft 4.0 .NET Framework to help developers, researchers, and scientists. AMPHORA ("AutoMated Phylogenomic infeRence Application") http...3754 days ago
CNIDARIA: fast, reference-free phylogenomic clustering
Motivation: Identification of biological specimens is a major requirement for a range of applications. Reference-free methods analyse unprocessed sequencing data without relying on prior knowledge, but these do not scale to arbitrarily large genomes and arbitrarily large phylogenetic distances. ...Tags: Bioinformatics, CNIDARIA, Fast, Reference-free, Phylogenomic, Clustering, NGS
2877 days ago
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
ETE v3, featuring numerous improvements in the underlying library of methods, and providing a novel set of standalone tools to perform common tasks in comparative genomics and phylogenetics. The new features include (i) building gene-based and supermatrix-based phylogenies using a single comm...Tags: ETE3, Reconstruction, Analysis, Visualization, Phylogenomic, Data
2264 days ago