k-mers tutorial - classification and taxonomy
DNA k-mers underlie much of our assembly work, and we (along with many others!) have spent a lot of time thinking about how to store k-mer graphs efficiently, discard redundant data, and count them efficiently. More recently, we've been enthused about using k-mer based simila...Tags: kmer, k-mer, taxonomy, classification, tree, plot, database, similarity, comparision
977 days ago
Comparative genomics visualisation tools !
Comparative genomics visualisation tools !Tags: Comparative, genomics, genome, visualisation, view, see, plot, tools, tool
802 days ago
Collection of Graph Visualization tools !
Standard approaches to genome inference and analysis relate sequences to a single linear reference genome. This is efficient but has a fundamental problem: Differences from this reference are hard to observe and describe in a coherent way. Variation and sequence are separated. https://fu...Tags: graph, map, vg, plot
460 days ago
Tags: circos, visualization, plot
420 days ago