Statistical for biological research
There is no disputing the importance of statistical analysis in biological research, but too often it is considered o...important statistical issues that biologists should be aware of and provides practic...2750 days ago
Understanding Greedy Algorithms
Learning greedy algo for biologist. https://www.topcoder.com/community/data-scie...://www.cs.rpi.edu/~magdon/ps/conference/super_biokdd.pdf https://ocw.mit.edu/courses/biology/7-91j-foundations-of-...2711 days ago
2597 days ago
AVID: A Global Alignment Program
A new global alignment method called AVID. The method is designed to be fast, memory efficient, and practic...2548 days ago
2501 days ago
Meraculous: De Novo Genome Assembly with Short Paired-End Reads
We describe a new algorithm, meraculous, for whole genome assembly of deep paired-end short reads, and apply it to th...kbp, and many gaps between contigs can be closed using paired-end placements. Practic...2381 days ago
2346 days ago
An Introduction to Applied Bioinformatics
IAB is primarily being developed by Greg Caporaso(GitHub/Twitter: @gregcapora...Lab at Northern Arizona University. You can find information on the courses I teach on my teaching w...2266 days ago
Multi-CAR: a tool of contig scaffolding using multiple references
we design a simple heuristic method to further revise our single reference-based scaffolding tool CAR into a new one...erences to more accurately order and orient the contigs of a draft genome. In practic...2262 days ago
SciLifeLab tutorial for bioinformatics analysis !
SciLifeLab is a national center for molecular biosciences with focus on health and environmental research. Courses Old courses (2012-2014) Metagenomics Wor...2220 days ago