Many-Core Engine (MCE) for Perl example
...Engine. MCE EXTRAS There are 4 add-on modules for use with MCE. MCE::Candy Provides a collection of sugar methods and output iterators for preserving output order. MCE::Mutex Pr...2659 days ago
QuorUM: An Error Corrector for Illumina Reads
...for subsequent assembly. It is designed around the novel idea of minimizing the number of distinct erroneous k-mers in the output reads and preserving the most true k-mers, an...2378 days ago
Scallop: reference-based transcriptome assembler for RNA-seq
...ng multi-exon transcripts as well as lowly expressed transcripts. Scallop achieves this improvement through a novel algorithm that can be proved preserving all phasing paths from reads...2197 days ago
fragScaff: Genome Assembly with Contiguity Preserving Transposition
Contiguity preserving transposition and sequencing (CPT-seq) is an entirely in vitro means of generating libraries comprised of 9216 indexed pools, each of which contains thou...2191 days ago
pggb: the pangenome graph builder
...tion of sequences into a pangenome graph (in the variation graph model). Its goal is to build a graph that is locally directed and acyclic while preserving large-scale variation. Mainta...1337 days ago
InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams
...with Venn diagrams including up to six sets. It offers a clean interface for Venn diagram construction and enables analysis of set unions while preserving the shape of the diagram. Set...684 days ago