Software packages for next gen sequence analysis
Integrated solutions * CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Helicos, and SOLiD data. Commercial next-gen-seq softwa...3255 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
...eads, written in Python; Package comes with 3 programs, marginAlign, marginCaller (c...ads in BAM files, run through variant calling programs to generate intermediate VCF...utput: LINKAGE Description:three main programs: mlink (calculates lod scores...2921 days ago
Worldwide funding agencies to fund your bioinformatics research !!
...o small businesses, the USNLM’s funding programs cover a diverse range of fiel...qualified individuals in outstanding training programs or responsible for training....by InfoEd International, SPIN (the Sponsored Programs Information Network) claims t...2950 days ago
2887 days ago
Genome Assembly Tools and Software - PART1 !!
...Short Reads, especially for RAD Rainbow package consists of several programs used for RAD-seq related clus...mon Assembly Format (CAF) CAFTOOLS comprises a set of libraries and programs for manipulating DNA sequence...2698 days ago
Awesome perl frameworks, libraries and software - PART 1
...puto/reflex - Reflex is a class library for writing reactive Perl programs. It provides base classes for...yerx/perl-android-scripts - Collection of Perl scripts (examples, programs) that run on Android using AS...2502 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
...e dissimilarity measures d2* and d2 S under different Markov chain models (using k-words) R package http://www-rcf.usc.edu/~fsun/Programs/NGS-MC/NGS-MC.html Species i...2384 days ago
Converting BLAST output into CSV
...all this BLAST output. Generally, that’s the case - you want to retrieve all matches, or do a reciprocal BLAST, or something. As with most programs that run on UNIX, the text ou...2350 days ago
Bioinformatics Web Application Development with Perl
...ming. Its presence everywhere made it popular and, in some ways, the duct tape of the Internet. Web Application Development The old days of CGI programs and the simple development st...2334 days ago
Linux Commands Cheat Sheet for Bioinformatics and Computational Biology Professionals
...an only read - good for web pages chmod 755 file — you can read, write, and execute, and everyone else can read and execute - good for programs that you want to share Netw...2293 days ago