Tags: Bioinformatics, NGS, Guide, Project, Tutorial
2593 days ago
SIMBA: a Genome Assembly Project Management System
SIMBA, SImple Manager for Bacterial Assemblies, is a Web interface for managing assembly projects of bacterial genomes. SIMBA was created to assist bioinformaticians to assemble bacterial genomes sequenced with NextGeneration Sequencing (NGS) platforms quickly, easily and effectively. SIMBA also ...Tags: SIMBA, Genome, Assembly, Project, Management, System
1987 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All genomes in the dataset were sequenced to at least 30x coverage using Illumina technology. The sequencing reads were mapped and genotyped using a customized procedure that was optimized for population genetic analy...Tags: Simons, Genome, Diversity, Project
1096 days ago
Tags: ENCODE, Project, Genome, Reference, Data, Ftp, Download, Human
966 days ago
Tags: Kubeflow, open, community, driven, project, easy, deploy, manage, ML, stack, Kubernetes
2000 days ago
genoPlotR - plot gene and genome maps project!
genoPlotR is a R package to produce reproducible, publication-grade graphics of gene and genome maps. It allows the user to read from usual format such as protein table files and blast results, as well as home-made tabular files. Features Linear representation of several segments of DNA Comp...Tags: genoPlotR, plot, gene, genome, maps, project, R
1974 days ago
Tags: BioContainers, community-driven, project, provides, infrastructure, guidelines, create, manage, distribute, bioinformatics, packages
1539 days ago
The Breeding API (BrAPI) project
The Breeding API (BrAPI) project is an effort to enable interoperability among plant breeding databases. BrAPI is a standardized RESTful web service API specification for communicating plant breeding data. This community driven standard is free to be used by anyone interested in plant breeding da...Tags: Breeding, API, BrAPI, project, plant, databases
1218 days ago