Results for "Protein sequence/structure annotation"
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You are requested to please bookmark collection of bioinformatics tools, scripts, codes that can be pieced together in a very easy and flexible manner to perform both sim...3248 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach referen...3235 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All genomes in the dataset were sequenced to at least 30x coverage using Illumina technolo...1106 days ago
- Collection of Python libraries to parse bioinformatics files, or perform computation related to assembly, annotation, and comparative genomics.
1106 days ago
Barrnap: Bacterial ribosomal RNA predictor
Barrnap predicts the location of ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5...2564 days ago
- MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein in...
2634 days ago
- MAKER is a portable and easily configurable genome annotation pipeline.Its purpose i...s. MAKER identifies repeats, aligns ESTs and proteins to a genome, produces ab-initio...tomatically synthesizes these data into gene annotations having evidence-based qualit...
3024 days ago
- Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs More at http://busco.ezlab.org/
3024 days ago
- RATT is software to transfer annotation from a reference (annotated) ge...was first developed to transfer annotations between different genome ass.... However, it can also transfer annotations between strains and even dif...tion would be lost in a de novo annotation. More at http://ratt.sourcef...
3024 days ago
- CrossMap is a program for convenient conversion of genome coordinates (or annotation files) between different assemblies (such as Human hg18 (NCBI36) <> hg19 (GRCh37), Mouse mm9 (MGSCv37) <> mm10...
3023 days ago
