2097 days ago
1944 days ago
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
...ure. It has also proved useful in detecting undocumented frameshifts in public database sequences and in ali...e. For further details about the underlying algorithm see the original publication:MACSE: Multiple Alignmen...1917 days ago
TRITEX sequence assembly pipeline for Triticeae genomes
The pipeline is open-source and hosted in a public Bitbucket repository. TRITEX has been run on highly inbred genotypes of barley (Hordeum vulgare), tetraploid wheat (Trit...1734 days ago
Genome in a Bottle (GIAB) Consortium
The Genome in a Bottle (GIAB) Consortium is a public-private-academic consortium hosted by NIST to develop the technical infrastructure (reference standards, reference methods, and re...1576 days ago
1568 days ago
Rcorrector: efficient and accurate error correction for Illumina RNA-seq reads
...footprint for 100 million reads, it can be run on virtually any desktop or server. The software is available free of charge under the GNU General Public License from https://git...1565 days ago
shinyCircos: an R/Shiny application for interactive creation of Circos plot
...al user interface for interactive creation of Circos plot. shinyCircos can be easily installed either on computers for personal use or on local or public servers to provide online use...1563 days ago
1557 days ago
BlobToolKit: A toolkit for genome assembly QC
...Tools2 and the Viewer. The BlobToolKit Pipeline is a configurable Snakemake pipeline that automates all steps from retrieving public datasets through running anal...1549 days ago