3944 days ago
3944 days ago
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are: To show the extent...3941 days ago
List of bioinformatics open source projects/software.
Open source software is software that can be freely used, changed, and shared (in modified or unmodified form)...anguage toolkit BioPHP http://www.biophp.org/ PHP language toolkit Biopython http://biopython....3754 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
List of generic simulation software/tools/resource with brief description and homepage...nil.ch/dee/page36926_fr.htmlEggLib EggLib is a C++/Python library and program package f...Pedigrees http://watson.hgen.pitt.edu/FFPopSim C++/Python...3734 days ago
List of In-silico Binding Site Prediction Tools
...examine the characteristics of the binding sites of single proteins or classes of proteins such as Kinases...e SiteHound-web server can be used to produce Affinity maps or MIFs. A python script named 'auto.py' is prov...3741 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for N...ranges within Bioconductor's BioC-Seq domain. Its classes and methods provide support f...to the IRanges container, the GRanges/GRangesList classes are more flexible and extensi...3622 days ago
Commercial and public next-gen-seq (NGS) software
Integrated solutions CLCbio Genomics Workbench - de novo and reference assembly of Sanger, Roche FLX, Illumina, Hel...Rene Warren and Steven Jones at Canada's Michael Smith Genome Sciences Centre. Python/...3516 days ago
3546 days ago
Using Interval Trees to Query Genome Annotations by Position
To work on query related to overlapping genomic features: use IntervalTree python pkg http://informatics.malariagen.net/2011/07/07/using-interval-tr...genome-annotations-by-position/ http://hackmap.blogspot.de/2008/11/python-...3546 days ago