Results for "QC"
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...ontent per sequence GC content per sequence quality sequence length distribution More at http://www.bioinformatics.babraham.ac.uk/projects/fastqc/Help/3%20Analysis%20Modules/2939 days ago
HOMER: Software for motif discovery and next-gen sequencing analysis
This tutorial covers topics independently of HOMER, and represents knowledge which is important to know before diving head first into more advanced analysis tools suc...2928 days ago
- ...(TAGC plots) to visualise the contents of genome assembly data sets as a QC step Blaxter Lab, Institute...(TAGC plots) to visualise the contents of genome assembly data sets as a QC step. This repository accomp...
2880 days ago
- ...oid genomes. Use a different assembler for metagenomes and heterozygous diploid or polyploid organisms. Use a different assembler if a tool like FastQC reports your data quality is...
2814 days ago
Pacbio Long Reads Compatible Software and Tools
...ference-based alignment Consensus and variant calling RNA analysis Epigenetic base modifications and methylation Barcoding Genome Browsers Run QC Frameworks and APIs...2604 days ago
WGS Celera Assembler version 8.3rc2
...1 ca2ace.pl-rwxrwxr-x 1 urbe urbe 12K Apr 10 11:41 caqc_help.ini-rwxrwxr-x 1 urbe urbe 61K Apr 10 11:41 caqc.pl-rwxrwxr-x 1 urbe urbe ...0 11:40 mercy-rwxrwxr-x 1 urbe urbe 3,8K Apr 10 11:41 mergeqc.pl-rwxrwxr-x 1 urbe urbe 422K...2579 days ago
Metagenomics assembly workshop !!
...nomics assembly workshop. This tutorial will guide you through the typical steps of metagenome assembly and binning. The Tutorial Data Set FastQC Quality Control Assembly...2571 days ago
Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
...iltering, Trimming, Error Removing and Quality Control for fastq dataAfterQC can simply go through al...a folder and then output three folders: good, bad and QC folders, which contains...2362 days ago
MinION_GC: An R script to do some QC on MinION data
...s a lot quicker than most other things out there: it takes about a minute to analyse a 4GB flowcell on my laptop. https://github.com/roblanf/minion_qc2341 days ago
AfterQC: Automatic Filtering, Trimming, Error Removing and Quality Control for fastq data
...emoving and Quality Control for fastq data AfterQC can simply go through all fas...der and then output three folders: good, bad and QC folders, which contains good...stp instead. https://github.com/OpenGene/AfterQC2134 days ago
