Taverna Workflow Management System
...op client application) and the Taverna Server (which allows remote execution of workflows). Taverna is also available as a Command Line Tool for a quick execution of workflows from a...3908 days ago
Hagfish - assess an assembly through creative use of coverage plots
...rence sequence and a paired end re-sequencing data set. Hagfish has more power the larger the insert size of the paired end library is. Quick links: Installation,Oper...2899 days ago
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GenomeRing: alignment visualization based on SuperGenome coordinates
...for the integration of additional information such as experimental data or annotations. However, providing a visualization that still allows for a quick and comprehensive interpretat...2656 days ago
Genome Annotation Transfer Utility (GATU)
Genome Annotation Transfer Utility (GATU) was designed to facilitate quick, efficient annotation of similar genomes using genomes that have already been annotated. For example, whene...2525 days ago
Dot, an interactive viewer for genome-genome comparison
...genomics. Dot supports the output of MUMmer’s nucmer aligner the most commonly used software method for aligning genome assemblies. A quick script called DotPrep.py conv...2295 days ago
FinisherSC:a repeat-aware tool for upgrading de novo assembly using long reads
...of raw reads and contigs consists of special characters/formats, FinisherSC/MUMmer may not parse them correctly. In that case, you want to have a quick renaming of the names of cont...2077 days ago
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Quick tour of Genetic Algorithms !
The R package GA provides a collection of general purpose functions for optimization using genetic algorithms. The package includes a flexible set of tools f...1927 days ago