Comment on "Coronavirus Resources !"
SARS-CoV-2 SNP Calling pipeline https://github.com/DamienFr/CoV-homoplasy1465 days ago
Comment on "Coronavirus Resources !"
UK Covid consortium https://www.cogconsortium.uk/data/1465 days ago
Comment on "Coronavirus Resources !"
CoViD Selection analysis http://virological.org/t/selection-analysis-of-gisaid-sars-cov-2-data/4481465 days ago
Comment on "Coronavirus Resources !"
UK resource in CoViD19 http://cov-glue.cvr.gla.ac.uk/#/home https://macman123.shinyapps.io/ugi-scov2-alignment-screen/1465 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Molecular informatics journal is also a good alternative for bioinformatics tools publication https://onlinelibrary.wiley.com/toc/18681751/2020/39/41467 days ago
Comment on "List of gene ontology software and tools"
GeneSCF serves as command line tool for clustering list of genes based on functional annotation (Geneontology, KEGG, REACTOME and NCG). This tool requires gene list in the form of Entrez Gene IDs or Official gene symbols as a input. http://genescf.kandurilab.org/1498 days ago
Comment on "List of gene ontology software and tools"
Chen EY, Tan CM, Kou Y, Duan Q, Wang Z, Meirelles GV, Clark NR, Ma'ayan A. Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinformatics. 2013;128(14). http://amp.pharm.mssm.edu/Enrichr/1498 days ago
Comment on "collinearity: scripts to parse and analyse MCScanX collinearity output"
This python script is by far the best for MCscan https://github.com/tanghaibao/jcvi/wiki/MCscan-(Python-version)1516 days ago
Comment on "Important Journals, Blogs and Forums for Bioinformaticians"
Bioinformatics tools and packages is also accepted in G3 journal https://www.g3journal.org/content/software-and-data-resources-01516 days ago
Comment on "Installing Bio::SCF perl module"
In Ubuntu, you can try the following command to install perl packages: sudo apt-get install libbio-scf-perlsudo apt-get install -y bioperlsudo apt-get install -y libstatistics-distributions-perlsudo apt-get install -y libterm-progressbar-simple-perl1517 days ago