Frequently used bioinformatics tools for viral genome analysis !
...ironment for statistical computing. R Core Team (2013). R Foundation for Statistical Computing, Vienna, Austria. URL http://www.R-project.org/. RATT: RATT: Rapid Annotation Transfer To...1046 days ago
3008 days ago
A Post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs
...ly mapping reads to the current assembly. An improved version, especially correction Pacfic Bioscience assemblies (PacBio) can be found here. RATT, a tool to transfer the annot...2549 days ago
Tools for bacterial whole genome annotation
...ads to extend contigs and close gaps within the scaffolds; (iii) ICORN for identifying and correcting small errors in consensus sequences and; (iv) RATT for help annotation. The soft...2330 days ago