3939 days ago
Phylogenetic for Bioinformatics
Biologists estimate that there are about 5 to 100 million species of organisms living on Earth today. Evidence from morphological, biochemical, and gene sequence data s...3938 days ago
Bioinformatics Courses Around the World
Bioinformatics Courses around the world Here is the list Bioinformatics courses offered around the world. Reasons for constructing this page are: To show the extent...3935 days ago
Useful Links for Bioinformaticians
Bioinformatics demands knowledge of various inter-linked subjects. This page provide links of some the good computer, biology and related tutorials. Introduction...3122 days ago
Useful Publications and Websites for Deep Sequencing Data Analysis
...mbly and comparison to genome Full-length transcriptome assembly from RNA-Seq data without a reference geno...Trinity, and is available on Sourceforge.] Comprehensive analysis of RNA-Seq data reveals extensive RNA ed...3771 days ago
List of bioinformatics open source projects/software.
...GeneProf http://www.geneprof.org/GeneProf/ A web-based, bioinformatics software suite for the analysis of functional genomics experiments, e.g. RNA-seq or ChIP-seq. GeneTalk http:...3748 days ago
List of generic simulation software/tools/resource with brief description and homepage !!!
...S BEERS was designed to benchmark RNA-Seq alignment algorithms and also...forms and alternate splicing from RNA-Seq data http://cbil.upenn.edu/be...of the experimental pipelines for RNA-Seq, employing a minimal set of p...on/rlsim A package for simulating RNA-seq library preparation with para...3729 days ago
Next generation sequencing in R or bioconductor environment
...b site) SPP: ChIP-seq processing pipeline SPP Tutorial MACS SIPeS RNA-Seq Analysis Counting Reads that...tion A variety of additional R packages are available for normalizing RNA-Seq read count data and identifyi...3616 days ago
Commercial and public next-gen-seq (NGS) software
...and qPCR data analysis. Streamlined analysis workflows for: ChIP-Seq, RNA-Seq, DNA-Seq, DNA Methylation, Ge...riptomics ERANGE - Mapping and Quantifying Mammalian Transcriptomes by RNA-Seq. Supports Bowtie, BLAT and EL...3511 days ago
3488 days ago