Results for "Refinement"
Bookmarks
BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between...2195 days ago
GFinisher: a new strategy to refine and finish bacterial genome assemblies
GFinisher is an application tools for refinement and finalization of prokaryotic genomes assemblies using the bias of GC Skew to identify assembly errors and organizes the contigs/scaff...2131 days ago
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Top-level pages
- ...erized by MD simulations. Molecular mechanics or molecular dynamics based approaches are also necessary for homology modelling and for structure refinement in X–ray crystallograph...
3969 days ago
Tools for Protein-Protein Docking !
...d electrostatics Re-scoring and clustering. Refinement of interface side-chains 3D-...potential Side chain and backbone dihedral refinement DOT Global rigid search: FF...solvation energy termsMD simulated annealing refinement . Filtering based on external...2224 days ago
Bio-Scripts
- ...ls complex structural variants -------------------------------------------------------------------------------------- Variant Evaluation and Refinement: Tools that eva...
2097 days ago
Tags
- BLASR (Basic Local Alignment with Successive Refinement) for mapping Single Molecule Sequencing (SMS) reads that are thousands to tens of thousands of bases long with divergence between the read and genome dominated by insertion and deletion error. Here is how I use the blasr to align PacBio rea...
Tags: Mapping, single, molecule, sequencing, reads, Basic, Local, Alignment, Successive, Refinement, BLASR
2195 days ago
Comments
Comment on "List of popular bioinformatics software/tools"
Mapping single molecule sequencing reads using Basic Local Alignment with Successive Refinement (BLASR) http://bix.ucsd.edu/projects/blasr/3031 days ago
