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Comparative genomics educational material and papers bookmarks
...re located. The number of porcine EBRs is comparable to the number of bovine-lineage-specific EBRs (100) reported earlier using a slightly lower resolution (500 kilobases (kb)),...2727 days ago
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GAM-NGS: genomic assemblies merger for next generation sequencing
...ments and stored in a weightedgraph. The merging phase is carried out with the help of this weighted graph that allows an optimal resolution of local problemati...2688 days ago
slacTree: SVG Large Annotated Circular Tree drawing
...SVG is used because it is a scalable format allowing for very small representations of entire trees or highly magnified regions with unlimited resolution Circular and radial trees ar...2492 days ago
orthodotter: Synteny plots (oxford grid)
...luster to be valid. -o <file> : output file, default is stdout -x <int> : resolution of x axis, default is 600 -y <int> : resolution on y axis, default is 600...2455 days ago
Rectangle Graph for Repeat Resolution in Genome Assembly
Ultimate tool for resolving repeats in genome assemblies. Though the specific implementation of the idea of the rectangle graph approach is already included into the&nbs...2314 days ago
HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution
Software accompanying "HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution" Preprint: http://biorxiv.org/content/early/2016/08/01/062117 Paper: http://genom...2273 days ago