Results for "Running"
Bio-Scripts
Perl script to run SATSUMA in loop !
#!/usr/bin/perl -w use strict; use File::Temp qw(tempfile); # Usage perl 1by1.pl for SATSUMA analysis # User need to set the reference multifasta file name here...2134 days ago
- ...---------------------------------------- # running normalization on reads: $VAR1...---------------------------------------- * Running CMD: jellyfish count -t 40 -m...ir/chrysalis/iworm.bowtie.nameSorted.bam" * Running CMD: /home/urbe/Tools/trinity...
2121 days ago
Install Parrot Virtual Machine !
...which case I'll prompt you for a few pieces of info. Since you're running this program, you obviously h...ebug -d --imcc-debug[=HEXFLAGS] (see --help-debug) see docs/running.pod for more1531 days ago
- ➜ BorisTrinityAssembly /home/urbe/Tools/transrate-1.0.3-linux-x86_64/transrate _ _ | |_ _ __ __ _ _ __...
2117 days ago
Installing Porechop on Ubuntu !
...hop git:(master) python3 setup.py install running install running build running build_py crea.../adapter_align.o porechop/src/alignment.o running install_lib creating /home/u...op/__init__.py to __init__.cpython-36.pyc running install_egg_info running egg...2099 days ago
- ...ct" echo "[REAPR pipeline] Running facheck" echo "/home/urbe/To...fa" echo "[REAPR pipeline] Running preprocess" echo "/home/urbe...ts" echo "[REAPR pipeline] Running fcdrate" /home/urbe/Tools/Re...-------- set -e echo "Running reapr version 1.0.18 pipeline...
2093 days ago
- ...ers in /home/urbe/anaconda3/lib/python3.6/site-packages (from PyIntervalTree) (1.5.10) Building wheels for collected packages: PyIntervalTree Running setup.py bdist_wheel for PyIn...
2092 days ago
Install Python locally on shared Linux server !
...lines: export PATH=$HOME/python/Python-2.7.11/:$PATH export PYTHONPATH=$HOME/python/Python-2.7.11 #Finally, refresh the current session by running the command: source ~/.bas...2092 days ago
- ...run may be specified to output the generated command line without running it --java-options 'OPTION...media/jitendra/OSDisk/SNP/gatk-4.0.2.1/gatk-package-4.0.2.1-local.jar Running: java -Dsamjdk.use_async...
2069 days ago
Installing Platypus on Ubuntu !
...pus git:(master) make (py27) ➜ Platypus git:(master) ✗ make echo 'Building Platypus' Building Platypus cd src; python setup.py build running build running build_py running build runn...2013 days ago
