Five points for bioinformatics software/tools
...and cons of both kind of software/tools and try to assist (Hmmm not...s. The best part about open source tools/software is that they’...cian says “if you can do the same thing with commercial softwar...entirely wrong. Using proprietary tools does not absolve you of the...3722 days ago
3954 days ago
Tools to detect synteny blocks regions among multiple genomes
...e of two or more genes on the same chromosome) and conserved sy...d with Evolution Highway (EH) tool http://eh-demo.ncsa.illinois....icient and accurate automated tool for defining HSBs using datas...a generic sequence comparison tool for visualizing genome alignm...2624 days ago
List of gene ontology software and tools
...The Functional Classification Tool provides a rapid means to org.../ API https://github.com/chrisamiller/davidapi GOEAST (Institu...ology navigation and analysis tool. GOLEM is a userful tool whic...go@genomics.org.cn. Here is a sample output generated by WEGO h...3724 days ago
Computer simulation of genetic mechanism !!
...mal set of parameters. http://sammeth.net/confluence/display/sim...FIGG is a genome simulation tool that uses known or theorized...son's ms software to generate samples of DNA sequences with a bi...ode/5 phenosim A tool to add phenotypes to simulate...2989 days ago
How to install Perl modules on Mac OS X in easy steps !!
Today at work, I learned how to install Perl modules usi...all them: 1) Make sure you have the Apple Developer Tools (XCode) installed. These ar...out unavailable commands. 1.5) Install Command Line Tools (Recent XCode versions only)...2768 days ago
Structural variation: the hidden genomic treasure
...signature (Source: NatRev Genetics) Related tools, databases and publications...o segmental duplication, but is not exactly the same. Segmental duplications can s...nces for species biology have been documented. Tools CNVnatora tool for CNV disc...2717 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds for their current updates. Bioinformatics...ogue here can get a bit heated!). Blue Collar Bioinformatics: articles related tool validation and the open sourc...2657 days ago
Software and Tools to detect structure variation with long reads !!
...) or NGM-LR with the optional SAM attributes enabled! Mo...: A Structural Variation Tool. Why ask a single sv-detectio...official software package for tools described in Chaisson e...ina paired-end reads from WGS samples More at https://gi...2622 days ago
2544 days ago