Some useful Bioinformatics links
....gov/pubmed/24185095 MAFFT ver.7 - a multiple sequence alignment program https://ma....html Measuring the distance between multiple sequence alignments | Bioinformatics |...www.ncbi.nlm.nih.gov/pmc/articles/PMC3921174/ sequence - download.tardigrades.org &g...2256 days ago
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Tools to Predict the Impact of Missense Variants !
...aster‐2 (MT2)“Evaluation of the disease‐causing potential of DNA sequence alterations” MutationA...ations that disrupt highly conserved amino acids within protein‐coding sequences, which are likely to be unco...2217 days ago
Protein-Protein Interaction Sites Predictions !
...odeling of complex structures HotPOINT Prediction of protein interfaces using an empirical model ISIS Prediction of interaction hotspots from sequence KFC server Automated decisi...2216 days ago
Ancestral sequence reconstruction steps !
Ancestral sequence reconstruction (ASR) – also known as ancestral gene/sequence reconstruction/resurrection&n...2193 days ago
LINKS scaffolder bloomfilter setting !
...✗ cd .. ➜ bin git:(master) ✗ ./LINKS Usage: ./LINKS [v1.8.6] -f sequences to scaffold (Multi-FASTA format, required) -s file-of-filenames, full path to long sequence reads or MPET pairs [see belo...2165 days ago
Understanding BLASTn output format 6 !
...NA against DNA, for example gene sequences against a reference genomebl...1. qseqid query (e.g., gene) sequence id 2. sseqid subjec...accesion.versionqlen Query sequence lengthsseqid Subject Seq-i...seq Aligned part of subject sequenceevalue Expect valuebitscore...2153 days ago
Bioinformatics Training Courses At RASA LSI
...s are crafted meticulously, covering different modules of courses such as Bioinformatics course, In silico Drug Discovery course, Next Generation Sequence data analysis course, Molecul...1656 days ago
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Steps to find all the repeats in the genome !
...ou need to install RepeatMasker on your system. You can download it from the RepeatMasker website[0]. Prepare the genome sequence: Make sure you have the genome sequence in a FASTA file format. Let's...262 days ago