Next Generation Sequencing (NGS) Tutorials
...nd genotyping using next-generation DNA sequencing data PubMed: 21478889 SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine div...3489 days ago
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Nemo – A stochastic, individual-base, genetically explicit simulation platform
A recombination map has been added for all multi-locus traits. The map positions (chromosomal) for neutral markers (e.g. SNPs) and loci under selection (QTLs, deleterio...2774 days ago
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chromoMap-An R package for Interactive Visualization and Annotation of Chromosomes
...egant graphics visualization of the chromosomes or chromosome regions of any living organism allowing users to map chromosome elements (like genes, SNPs etc.) on the chromosome plot....1852 days ago
Hapsembler: An Assembler for Highly Polymorphic Genomes
Hapsembler is a haplotype-specific genome assembly toolkit that is designed for genomes that are rich in SNPs and other types of polymorphism. Hapsembler can be used to assemble reads from a variety of platforms including Illumina and Roche/454. http://compbio.cs.toronto.edu/hapsembler/2177 days ago