RNAcon: web-server for the prediction and classification of non-coding RNAs
RNAcon is a web-server for the prediction and classification of non-coding RNAs. It uses SVM-based model for the discr...(Linux-based command-line) of RNAcon is freely available for the global scientif...2486 days ago
LIBSVM -- A Library for Support Vector Machines
LIBSVM is an integrated software for support vector classification, (C-SVC, nu...using second order information for training SVM. Journal of Machine Learning Research 6, 1889-1918, 2005. You can a...2470 days ago
RITA: Rapid identification of high-confidence taxonomic assignments for metagenomic data
RITA is a standalone software package and Web server for taxonomic assignment of metagen...Rapid identification of taxonomic assignments. Accepted to Nucleic Acids Research April 4, 2012. If you h...2353 days ago
Foldit: Solve Puzzles for Science
Foldit is an online puzzle video game about protein folding. It is part of an experimental research project developed by the Univ...2328 days ago
An Introduction to Applied Bioinformatics
IAB is primarily being developed by Greg Caporaso(GitHub/Twitter: @gregcaporas...on the courses I teach on my teaching website and information on my research and lab on my lab websit...2258 days ago
UCSC SARS-CoV-2 Genome Browser
The UCSC SARS-CoV-2 Genome Browser (https://genome.ucsc.edu/covid19.html) is an adaptati...des. We invite all investigators to contribute to this resource to accelerate research and development activities gl...852 days ago
SciLifeLab tutorial for bioinformatics analysis !
SciLifeLab is a national center for molecular biosciences with focus on health and environmental research. Courses Old courses (2012-...2212 days ago
fragScaff: Genome Assembly with Contiguity Preserving Transposition
Contiguity preserving transposition and sequencing (CPT-seq) is an entirely in vitro mea...formation for de novo genome assembly via transposase contiguity. Genome Research 2014 Dec;24(12):2041-9. doi:&...2185 days ago
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HapCUT2: robust and accurate haplotype assembly for diverse sequencing technologies
HapCUT2 is a maximum-likelihood-based tool for assembling haplotypes from DNA sequence r...nly. VCF input should contain diploid variants. If you use HapCUT2 in your research, please cite: Edge, P., Ba...2184 days ago