Results for "Sequence"
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...to represent positions and locations (ranges of positions) on sequences, particularly nucleotide sequences. My original motivation for...handing the locations of genes in eukaryotic genomes. Handle sequence locations for bioinformatics...3409 days ago
- Some of the useful bioinformatics scripts. For example ... contig-stats.pl is a Perl script that will automatically describe features of a sequence assembly. http://milkweedgenome.org/?q=scripts
3354 days ago
- ...he frist generation), Solexa/illumina, SOLiD/ABi, 454/Roche. But thier sequence format is different, also the...t for further analysis or data mining. There are many pipeline for raw sequence quality analysis and control...
3227 days ago
Assembly and diploid architecture of an individual human genome via single-molecule technologies
The research work shows that it is now possible to integrate single-molecule and high-throughput sequence data to generate de novo assembled genomes that approach reference quality. h...3214 days ago
Simons Genome Diversity Project
Complete genome sequences from more than one hundred diverse human populations All genomes in the dataset were sequenced to at least 30x coverage usi...eles toward matching the human genome reference sequence, and determined genotypes on...1086 days ago
Barrnap: Bacterial ribosomal RNA predictor
...nomes. It supports bacteria (5S,23S,16S), archaea (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S). It takes FASTA DNA sequence as input, and write GFF3 as o...2543 days ago
- MetaPred2CS Web server is a meta-predictor based on Support Vector Machine (SVM) that combines 6 individual sequence based protein-protein interaction prediction methods...
2613 days ago
- ...different Leishmania species or Salmonella enterica onto other Salmonella serotypes. RATT is able to transfer any entries present on a reference sequence, such as the systematic id or...
3003 days ago
- ...basic data structures for efficient data manipulation (mostly genomic sequences, alignments, variation etc.)...as specialized tool sets for various analyses. It also features three sequence alignment packages: Satsuma,...
3001 days ago
- LAST can: Handle big sequence data, e.g: Compare two vertebrate genomes...the reliability of each aligned column. Use sequence quality data properly. Compa...proteins, with frameshifts. Compare PSSMs to sequences Calculate the likelihood of...
2972 days ago
