Results for "Sex chromosome"
Top-level pages
Genomics is the study of the genomes of organisms. The field includes intensive efforts to determine the entire DNA sequence of organisms and fine-scale genetic mapping e...3936 days ago
Next generation sequencing in R or bioconductor environment
There are many R software and bioconductor packages for NGS data analysis, some of...and extensible to store additional information about sequence ranges, such as chromosome identifiers (sequence space),...3618 days ago
List of Bioinformatics Software Tools for Next Generation Sequencing
Commercial tools Strand NGS offers many different tools including alignment,...ovo point mutations in families Input: GLF or BAM or VCF (must have identical chromosome orders) Output: VCF Bas...2902 days ago
- Bash Script source: https://gist.github.com/santhilal...e format. It generated two files1) Transcript wise chromosome location with information abo...14c7f4/sample.GTF_enst_annotation.txt)2) Gene wise chromosome location with information abo...
2100 days ago
- alignment: the mapping of a raw sequence read to a location within a reference gen...xample, if the genotype TT (both alleles are T) at position 1,299,132 in human chromosome 12 (reference G) is 37, this...
2863 days ago
Awesome perl frameworks, libraries and software - PART 1
A curated list of awesome Perl frameworks, libraries and software. major/MySQLTuner-perl - MySQLTuner is...Module vti/sockjs-perl - SockJS Perl Plack/PSGI implementation schwern/Sex -...2483 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in two taxa w...ed to characterize the larger DNA sequence and the chromosome in which it occurs. ho...ry (shared derived state). synteny -- Portions of chromosomes in which gene order is conse...2456 days ago
Alignment-free sequence comparison tools available for next-generation sequencing data analysis
kallisto Transcript abundance quantification from RNA-seq data (uses pseudo...ovo genome assembly MHAP Produces highly continuous assembly (fully resolved chromosome arms) from third-generation l...2365 days ago
Some useful Bioinformatics links
...on https://broadinstitute.github.io/picard/command-line-overview.html Chromosome-scale scaffolding of d...15/2210/2391162 Genome Architecture and Evolution of a Unichromosomal Asexual Nematode - ScienceDirect https:/...2235 days ago
