Structural variation: the hidden genomic treasure
...de spectrum of SVs in many organisms and infer the effects of selection shaping their evolutionary trajectories. Structure variation sequencing signature (Source: NatRev Genetics)...2713 days ago
Software and Tools to detect structure variation with long reads !!
...mber of local assemblies supporting each call Higher sensitivity for SV calls using tiled local assemblies across the entire genome instead of "signature" regions Genotyping of SVs w...2618 days ago
dbCAN: a web server and DataBase for automated Carbohydrate-active enzyme ANnotation
...ome submitted by the user; dbCAN provides an explicitly defined signature domain for each and ever...gnments, hidden markov models (HMMs) and phylogenies of the signature domain regions in each and ev...2544 days ago
DarkHorse: a method for genome-wide prediction of horizontal gene transfer
...sfer candidate proteins is presented. The method is quantitative, reproducible, and computationally undemanding. It can be combined with genomic signature and/or phylogenetic tree-buil...2520 days ago
Quick next generation sequencing (NGS) terms definition
...is considered discordant. Note that, by definition, the discordant read pairs signal potential SVs. The sequence signature produced by these type of reads is known as read-pair signature.split reads: a read that...2533 days ago
Protein function annotation and machine learning - UPMC - Paris, France
...A novel integrative platform for large scale protein annotation that exploits a multitude of diversified probabilistic models in several protein signature databases. We propose a no...3575 days ago
Research Associate at National Research Centre on Plant Biotechnology New Delhi
...tificate from previous employer to be attached): I hereby declare that the information provided above is true to the best of my knowledge. Date: Signature Advertisement: www.nrcp...3349 days ago
1965 days ago
Perl script to insert sequence in contig !!
# sub signature: #insertSEQintoCONTIGatLOC( SEQ , CONTIG , LOC ) ; sub insertSEQintoCONTIGatLOC{ my ( $SEQ , $CONTIG , $LOC ) = @_; substr( $CONTIG , $LOC , -lengt...2719 days ago
2086 days ago
Comment on "NGMLR: long-read mapper designed to align PacBio or Oxford Nanopore"
...quest&X-Amz-Date=20200203T053558Z&X-Amz-Expires=300&X-Amz-Signature=b1296e688d4302fc16aa87537812e...quest&X-Amz-Date=20200203T053558Z&X-Amz-Expires=300&X-Amz-Signature=b1296e688d4302fc16aa87537812e...1564 days ago