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Results for "Single molecule Sequencing"

Wire posts

  • Rahul Nayak

    Multi-line fasta to single line fasta $ perl -pe '/^>/ ? print "\n" : chomp' in.fasta | tail -n +2 > out.fasta #Multiline #Singleline #Fasta

    2077 days ago

  • Abhimanyu Singh

    Efficiency of #PacBio long read #correction by 2nd generation #Illumina sequencing https://www.sciencedirect.com/science/article/pii/S0888754317301660

    2075 days ago

  • Neelam Jha

    Multifasta to singleline fasta. $ awk '/^>/ {printf("\n%s\n",$0);next; } { printf("%s",$0);} END {printf("\n");}' < file.fa #Multi #Single #Fasta #Convert

    2051 days ago

  • Abhimanyu Singh

    #BLASTCLUST - BLAST score-based single-linkage #clustering. http://nebc.nerc.ac.uk/bioinformatics/documentation/blast/blastclust.html

    2049 days ago

  • BioJoker

    #CheckM provides a set of tools for #assessing the #quality of #genomes recovered from isolates, single cells, or #metagenomes. http://ecogenomics.github.io/CheckM/

    1952 days ago

  • Jit

    polySNP: an analysis tool for quantitative sequencing https://www.nybg.org/files/scientists/dlittle/polySNP.html #SNP #polySNP #analysis #peak #Area

    1911 days ago

  • Abhimanyu Singh

    How to calculate the coverage for a NGS experiment https://www.ecseq.com/support/ngs/how-to-calculate-the-coverage-for-a-sequencing-experiment #NGS #Coverage

    1815 days ago

  • BioJoker

    NanoPipe—a web server for nanopore MinION sequencing data analysis https://academic.oup.com/gigascience/article/8/2/giy169/5300120 #NanoPipe #Server #ONT #Nanopore

    1802 days ago

  • Jit

    Nanopore sequencing and #assembly of a human genome with ultra-long reads https://www.nature.com/articles/nbt.4060

    1787 days ago

  • LEGE

    Multiline to singleline covert. $ awk '/^>/ {printf("%s%s\t",(N>0?"\n":""),$0);N++;next;} {printf("%s",$0);} END {printf("\n");}' < input.fa #Multi #Single #Convert #awk

    1631 days ago

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