How to install Perl modules manually, using CPAN command, and other quick ways
As a bioinformatics programmer, and crunchy data analyser you need to install several pe...rs: moduleslibbio-samtools-perl - Perl interface to SamTools library for DNA sequencinglibbiojava-java - Java API to...3950 days ago
Tools to detect synteny blocks regions among multiple genomes
The synteny block (which etymologically means “on the same ribbon”) is a collection of contiguous genes located on the same chromosome. These block regions ha...2610 days ago
The 5 reasons to mistakes at bioinformatics work !!!
When you're just starting out with biological programming, it's easy to run into complex problems that make you wonder how anyone has ever managed to write a program. The...2106 days ago
Dynamic chromosome breakpoints !!!
Cell division involves the distribution of identical genetic material, DNA, to two daughters’ cells. During this process, duplicated deoxyribonucleic acid (DNA) goe...3553 days ago
Computer simulation of genetic mechanism !!
Computer simulation is the discipline of d...rate synthetic next-generation sequencing data by mimicking real sequencing process with empirical error...GemSIM Next generation sequencing read simulator http://sourcef...genome or whole-exome next-gen sequencing data, with an emphasis on use...2975 days ago
Tools and Method for Haplotype phasing !
Huge amounts of genotype data are being produced with recent technological advances, bot...e SNP microarrays and from ever more accessible whole-genome and whole-exome sequencing methods. The vast amount of k...1339 days ago
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Structural variation: the hidden genomic treasure
Genome re-sequencing projects have revealed substantial...yse SVs/CNVs using high-throughput sequencing and different analytical appr...ds of detection in next generation sequencing data (paired end mapping, spl...notyping and visualization in deep sequencing data Link PEMer, st...2703 days ago
Important Journals, Blogs and Forums for Bioinformaticians
Journals. Most journals have RSS feeds for their current upd...of code: Lex Nederbragt’s blog on biology, sequencing, bioinformatics, … Si...;tidyverse, and more. nextgenseek.com: Next-Gen Sequencing Blog covering new development...2643 days ago
Software and Tools to detect structure variation with long reads !!
Uncovering the connection between genetics and...p;Single Molecule, Real-Time (SMRT) Sequencing, you can access structural va...ation caller using third generation sequencing Sniffles is a structural var...data, or data from a combination of sequencing platforms. There are two pie...2608 days ago