DRAWID: user-friendly Java software for chromosome measurements and idiogram drawing
"DRAWID has number of advantages including a user-friendly interactive interface, possibility for simultaneous chromosome and FISH/GISH/banding signal measurement and idiogram drawing as well as number of useful functions facilitating the procedure of chromosome analysis," explain the scientists....Tags: DRAWID, user-friendly, Java, software, chromosome, measurements, idiogram, drawing
2345 days ago
Tags: MashMap, fast, approximate, software, mapping, long, reads, PacBio, ONT, assembly, reference, genome(s)
2330 days ago
GenomeTools: The versatile open source genome analysis software
The GenomeTools genome analysis system is a free collection of bioinformatics tools (in the realm of genome informatics) combined into a single binary named gt. It is based on a C library named “libgenometools” which consists of several modules. If ...Tags: GenomeTools, versatile, open, source, genome, analysis, software
2273 days ago
EWAS: epigenome-wide association study software 2.0
EWAS2.0 can analyze EWAS data and identify the association between epigenetic variations and disease/phenotype. On the basis of EWAS1.0, we have added more distinctive features. EWAS2.0 software was developed based on our “population epigenetic framework” and can perform: (1) epigenom...Tags: EWAS, epigenome-wide, association, study, software
2231 days ago
Tags: RAVEN, Reconstruction, Analysis, Visualization, Metabolic, Networks, Toolbox, software, suite, Matlab, semi-automated, reconstruction, genome-scale, models, GEMs
2013 days ago
Tags: DECIPHER, software, toolset, decipher, biological, sequences, efficiently, R
1967 days ago
Tags: Genobuntu, software, package, packages, oriented, NGS, assembly, genome
1966 days ago
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
OAT uses OrthoANI to measure the overall similarity between two genome sequences. ANI and OrthoANI are comparable algorithms: they share the same species demarcation cut-off at 95~96% and large comparison studies have demonstrated both algorithms to produce near identical reciprocal similarities....Tags: OrthoANI, improved, algorithm, software, calculating, average, nucleotide, identity, ANI
1965 days ago
Tags: raghavagps, gpsrdocker, docker-based, container, software, web, servers, developed, bioinformatics
1961 days ago
GenoViz: Visualization software for genomics
GenoViz provides software applications and re-usable components for data visualization and data sharing in genomics. Our flagship product is Integrated Genome Browser (IGB).For more information about IGB, visit http://bioviz.org.Source code for the project was hosted here for many years. In ...Tags: GenoViz, Visualization, software, genomics, chromosomes
1944 days ago