The #Development of #Computational Biology in #SouthAfrica: #Successes Achieved and #Lessons Learnt http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004395
A perl script for mapping fasta formated sequences to multiple reference sequences using one of several alignment programs. http://seq.crg.es/download/software/Miro/doc/run_Mapping.html #Perl #Script
One code to find them all is a set of perl scripts to extract useful information from RepeatMasker http://doua.prabi.fr/software/one-code-to-find-them-all