2640 days ago
ChromHMM: Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin d...r more cell types. By automatically computing state enrichments for large-scale f...tates the biological characterization of each state. Chr...2586 days ago
2518 days ago
GeneProf: analysis of high-throughput sequencing experiment
GeneProf is a web-based, graphical software suite that allows users to analyse data...for Regenerative Medicine / Institute for Stem Cell Research, University of Edinburgh and has ben...2508 days ago
dipSPAdes: Assembler for Highly Polymorphic Diploid Genomes.
While the number of sequenced diploid genomes have been steadily increasing in the last few years, assembly of hi...graph assembler, dipSPAdes, for HP genomes that significantly improves on the state-of-t...2340 days ago
Foldit: Solve Puzzles for Science
Foldit is an online puzzle video game about protein folding. It is part of an experimental research project developed by the University of Washington, Center for Gam...2339 days ago
Ra assembler - a de novo DNA assembler for third generation sequencing data
Integration of the Ra assembler - a de novo DNA assembler for third generation sequencing data developed on Facul...of Ra by integrating it into a complete de novo assembly tool. Unlike other state-of-t...2333 days ago
Alien_Hunter : prediction of putative Horizontal Gene Transfer (HGT) events
Alien_hunter is an application for the prediction of putative Horizontal Gene Transfer (HGT) events with the impl...red to fixed-order methods. Optionally the predictions can be parsed into a 2-state 2nd...2322 days ago
An Introduction to Applied Bioinformatics
IAB is primarily being developed by Greg Caporaso(GitHub/Twitter: @gregcaporaso) in the Caporaso Lab at Northern Arizona University. You can find information on...2269 days ago
EvidentialGene: tr2aacds, mRNA Transcript Assembly Software
EvidentialGene is a genome informatics project, "Evidence Directed Gene Constructio...ccurate gene sets for animals and plants, developed by Don Gilbert at Indiana University, seehttp://arthropods.eugenes...2202 days ago