CSA: A high-throughput chromosome-scale assembly pipeline for vertebrate genomes
...nce genomes for ordering the contigs and thus support the assembly process. This typically results in improved contig N50 when compared to current state of the art methods. For sm...1166 days ago
Caretta – A multiple protein structure alignment and feature extraction suite
...eant for homologous but sequentially divergent protein families which consistently returns accurate alignments with a higher coverage than current state-of-the-art tools. Caretta is...1248 days ago
Comparative Genomics Workshops !
This meeting's objective was to obtain a big picture look at the current state of the field of comparative genomics with a focus on commonalities across genomic investigations i...845 days ago
Orthoflow: workflow for phylogenetic inference of genome-scale datasets of protein-coding genes
...forward to work from a combination of input sources including annotated contigs in Genbank format and FASTA files containing CDSs. It uses several state of the art inference methods...88 days ago
MIKE: an ultrafast, assembly-, and alignment-free approach for phylogenetic tree construction
...ion of phylogenetic trees based on the resultant Jaccard coefficient. Simulation results highlight the superior speed of MIKE compared to existing state-of-the-art methods. We used M...41 days ago