Perl script to convert GFF 2 FASTA !
...###### # cds - translated sequence (starting with ATG and ending with a stop codon included) # cdna - tra...ing untranslated exons) # protein - cds translated (includes a * as the stop codon) # gene - the entire g...2151 days ago
2111 days ago
To convert just one specific read group to fastq
# Stop script on error. set -uex # The SRR BioProject number for the sequencing data. PROJECT=PRJNA257197 # The number of datasets to subselect from the project...1555 days ago
Installing docker for Bioinformatics on Ubuntu !
...h Search the Docker Hub for images start Start one or more stopped containers stats Display a live stream of container(s) resource usage statistics stop Stop one or more runni...1526 days ago
Tadpole is 250x faster than SPADes assembler !
...at most this many bases. extendright=100 (er) Extend to the right by at most this many bases. ibb=t (ignorebackbranches) Do not stop at backward branches. extend...988 days ago