Results for "Structural Bioinformatics"

Bookmarks

  • Fancy Oneliner for Bioinformatics !!

    This webpage lists some of the one-liners that we frequently use in metagenomic analyses. You can click on the following links to browse through different topics. You can c...

    2873 days ago

  • Genome STRiP

    Genome STRiP (Genome STRucture In Populations) is a suite of tools for discovering and genotyping structural var...

    2812 days ago

  • Understanding PacBio

    This tutorial includes resources for learning more about PacBio data and bioinformatics analysis, and includes conten...ecialized applications. Training Resources: Bioinformatics Workshop (Webinars) Bioinfor...

    2641 days ago

  • LUMPY

    A probabilistic framework for structural variant discovery. Ryan M Layer, Colby Chiang, Aaron R Quinlan, and Ira M Hall. 2014. "LUMPY: a Probabilistic Framework for Structural Var...

    2824 days ago

  • GeneValidator - Identify problems with predicted genes

    GeneValidator helps in identifing problems with gene predictions and provide us...idator: identify problems with protein-coding gene predictions. Bioinformatics, doi: 10.1093/bioinformatics/btw015.    

    2823 days ago

  • Useful Bioinformatics Tools

    Collections of few handy tools for bioinformatician http://molbiol-tools.ca/Convert.htm

    2820 days ago

  • Sybil

    The Sybil software package provides a primarily web-based front-end to comparative gen...datasets warehoused in a chado relational database. It was developed by the bioinformatics department at The Institute f...

    2811 days ago

  • COSMIC

    The accurate description and annotation of structural variants can be complex.  This is due to the different resolution t...ment Overview page describes the one or more breakpoints which make up a structural&nbs...

    2786 days ago

  • GeneBreak: a tool to systematically identify genes recurrently affected by the genomic location of chromosomal CNA-associated breaks by a genome-wide approach

    Development of cancer is driven by somatic alterations, including numerical and structural chromosomal aberrations. Currently, several computational metho...ere is lack of computational methods that systematically detect structural chr...

    2168 days ago

  • Ribbon !!

    Visualization has played an extremely important role in the current genomic...nome-genome alignments is lost for structural variations in the one-dimensi...ly reference coordinates. Instead, structural variations captured by long r...ant-callers, and rapid curation of structural var...

    2767 days ago