Results for "Structural biology"
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Spines Spines is a collection of software tools, developed and used by the Vertebrate Genome Biology Group at the Broad Institute....p://www.broadinstitute.org/science/programs/genome-biology/spines3008 days ago
- HiCdat: a fast and easy-to-use Hi-C data analysis tool HiCdat is easy-to-use and provides solutions starting from ali...in-depth analyses. Importantly, HiCdat is focussed on the analysis of larger structu...
3005 days ago
- Ultrafast and accurate nucleotide-resolution analysis of structural variants More at http://bioinform.github.io/breakseq2/ Download BreakSeq2 Latest version: https://github.com/bi...
2987 days ago
mrFAST: Micro Read Fast Alignment Search Tool
mrFAST is a read mapper that is designed to map short reads to reference genome with a special emphasis on the discovery of structu...2931 days ago
SATSUMA : Highly sensitive whole-genome synteny alignments.
Satsuma is a whole-genome synteny alignment program. It takes two genomes, computes alignments, and then keeps only the parts that are orthologous, i.e. following the c...2914 days ago
Hagfish - assess an assembly through creative use of coverage plots
Hagfish is a tool that is to be used in data analysis of Next Generation Sequencing (NGS) experiments. Hagfish builds...in quality control of de novo genome assembly or identification of structu...2906 days ago
MOSAIK: A Hash-Based Algorithm for Accurate Next-Generation Sequencing Short-Read Mapping
MOSAIK is a stable, sensitive and open-source program for mapping second and third-generation sequencing reads to a re...as short insertions and deletions. To support the growing interest in larger structu...2906 days ago
- This histone database can be used to explore the diversity of histone proteins and their sequence variants in many org...blished to better understand how sequence variation may affect functional and structu...
2893 days ago
- Tools for making blobplots or Taxon-Annotated-GC-Coverage plo...a QC step Blaxter Lab, Institute of Evolutionary Biology, University of Edinburgh Goa...nbsp;Frontiers in Bioinformatics and Computational Biology special issue : Quality asses...
2883 days ago
- statistical analysis and visulization of functional profiles for genes and gene clusters...biological themes among gene clusters.” OMICS: A Journal of Integrative Biology, 16(5), pp. 284-287.Installat...
2879 days ago
