2870 days ago
Genome Assembly Tools and Software - PART1 !!
...itable for comparison. DNA Baser 4.36 – DNA Sequence Assembly & Analy...slation for either RNA-seq or DNA-seq SOLiD assemblies....Sequencher 5.4.1 – DNA Sequence Assembly and Analysi...hasing genomic variants using DNA sequencing reads, also called...2687 days ago
Phylogenetic & Molecular Genetics Terms and Definitions
analog -- A feature that appears similar in t...ly reflects evolutionary history. cDNA -- Complementary DNA; DNA that is synthesized, by...sequence isolated at random from a cDNA library, used for identificat...o with any other clade. repetitive DNA -- Sequences of DNA that are...2463 days ago
List of visualization tools for genome alignments
Genome browsers are useful not only for showing final re...ttp://www.sanger.ac.uk/resources/software/artemis/ DNannotator Annotation web...onal genomic sequences http://bioapp.psych.uic.edu/DNannotator.htm JVM Java...2285 days ago
Bioinformatics tools to detect horizontal gene transfer (HGT) in genomes
Horizontal gene transfer (HGT), the “non-sexual movemen...a eukaryotic species to gain a gene by HGT, foreign DNA must enter the host nucleus,...e donor and the host. Over the longer term, foreign DNA may become “domesticate...851 days ago
Some useful Bioinformatics links
...ased multi-objective optimization platform for synthetic gene design | Bioinformatics...dot plot for genome-genome alignments https://dnanexus.github.io/dot/ Zoho Acco...n — an evolutionarily conserved role for DNA inverted repeats in the genom...2243 days ago
2246 days ago
Tools to Predict the Impact of Missense Variants !
Prioritizing missense variants for further experimental inves...dquo;Evaluation of the diseaseācausing potential of DNA sequence alterations”...hat would have occurred if the element were neutral DNA, but did not occur because th...2204 days ago
Protein-Protein Interaction Sites Predictions !
The study of Protein–Protein Interactions (PPIs) has a...on with an empirical scoring function Other Sites (DNA, RNA, Metals) CHED We...ter A knowledge-based method for the prediction of DNA-protein interactions DISPLAR...2203 days ago
Learning Python Programming - a bioinformatician perspective !
Python Programming is a general purpose programming language that is open source, f...hich make it easy to manipulate strings of characters (for example, strings of DNA bases and protein amino acid...2184 days ago